BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B07LP1|AL426644
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1344 908 0.0
>3x_Contig1344
Length = 6608
Score = 908 bits (458), Expect = 0.0
Identities = 479/482 (99%), Gaps = 3/482 (0%)
Strand = Plus / Plus
Query: 269 aaaccatgattggttcatcaccgtttggtgcaactttttccaaagccatttcgatgactt 328
|||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1 aaaccatgattggt-catcaccgtttggt-caactttt-ccaaagccatttcgatgactt 57
Query: 329 tgttcaaaccatatctgtctacgtgatacatggagtatgaggcaataccgttatccttca 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tgttcaaaccatatctgtctacgtgatacatggagtatgaggcaataccgttatccttca 117
Query: 389 aaatctttctttcagcggcatcgacgtctcttagaccgatgtaggcgatcttctttggat 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aaatctttctttcagcggcatcgacgtctcttagaccgatgtaggcgatcttctttggat 177
Query: 449 ccaaacattttggaacccattttaaggatggaggagtgtttttagcatcaaggcccatca 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccaaacattttggaacccattttaaggatggaggagtgtttttagcatcaaggcccatca 237
Query: 509 agaaggagacaggacaaccgtgaatgttaccggattcagtagtagaacatgtgttgatat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agaaggagacaggacaaccgtgaatgttaccggattcagtagtagaacatgtgttgatat 297
Query: 569 cagcatgagcgtcaatccataacaaaccagcatttgggtatttgtccaagacgccagcca 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cagcatgagcgtcaatccataacaaaccagcatttgggtatttgtccaagacgccagcca 357
Query: 629 cggtaccgatagcgatcgagtgatcaccacctagggtcactgccaatctgccttcgttgg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cggtaccgatagcgatcgagtgatcaccacctagggtcactgccaatctgccttcgttgg 417
Query: 689 aaaccttcttaacggattcgtagattagttttgtggcttctccaaccaaatttggtcttt 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaaccttcttaacggattcgtagattagttttgtggcttctccaaccaaatttggtcttt 477
Query: 749 tc 750
||
Sbjct: 478 tc 479
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4681
Number of Sequences: 1807
Number of extensions: 4681
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)